Posts Tagged: Climate change
UCCE, USDA California Climate Hub launch CalAgroClimate decision-support tool
Climate and weather variability pose increasing risks to farmers. As world leaders gather in Egypt at COP27 to address the climate crisis, University of California Cooperative Extension and the USDA California Climate Hub are launching new web-based tools to provide farmers with locally relevant and crop-specific information to make production decisions that reduce risk.
“Integrating historical weather data and forecast information with meaningful agricultural decision support information holds the potential to reduce a crop's vulnerability to such risks,” said Tapan Pathak, UC Cooperative Extension climate adaptation specialist at UC Merced.
CalAgroClimate,” Pathak said.
Pathak is collaborating on building the decision support tool with partners from the U.S. Department of Agriculture, California Climate Hub, UC Cooperative Extension and UC Agriculture and Natural Resources' Informatics and Geographic Information Systems or IGIS.
“CalAgroClimate has been designed to support climate-enabled decision making for those working in the California specialty crop industry,” said Steven Ostoja, Director USDA California Climate Hub. “The USDA California Climate Hub is a proud collaborator on this important initiative to ensure the state's agricultural industry can continue to thrive in a future of climate change.”
Shane Feirer and Robert Johnson of UC ANR IGIS designed the interactive tools on the website and Lauren Parker of the USDA California Climate Hub contributed to content organization.An advisory panel composed of colleagues from UCCE and the Natural Resources Conservation Service ensure CalAgroClimate tools are relevant to stakeholder needs.
“CalAgroClimate is an amazing new tool that puts comprehensive past and forecast weather data at any grower's disposal,” said Mark Battany, UC Cooperative Extension water management and biometeorology advisor for San Luis Obispo and Santa Barbara counties.
“California's high-value crops are subject to a myriad of weather-related risk factors; this tool will allow growers to better address both near-term and long-term risks, and in the end grow more profitably, said Battany, who is a member of the CalAgroClimate advisory panel.
Growers and crop consultants can use CalAgroClimate's crop and location-specific tools and resources to help make on-farm decisions, such as preparing for frost or untimely rain and taking advantage of expected favorable conditions.
CalAgroClimate currently includes heat advisory, frost advisory, cropphenology and pest advisory tools.
Heat advisory tool: Extreme heat poses a danger for people, animals and crops. With this tool, users can select location and temperature threshold (e.g. 90 F, 95 F 100 F) based on their crop-specific heat tolerance level and the tool will provide a customized map of heat risk for next seven days for that location, including the number of consecutive days with temperature above that threshold. Users can also assess overall heat risks across the state for a selected temperature threshold as well. Having an early warning about hot temperatures, growers can take steps to reduce risks associated with extreme heat such as providing shade, changing farm workers' schedules and applying additional irrigation.
Frost advisory tool: Frost risk is a very serious issue for many specialty crops across California. Similar to the heat advisory tool, this tool provides a customized map of frost advisory for next seven days for a user's location, and forecast of consecutive days with temperature falling below the selected temperature thresholds (e.g. 35 F, 32 F, 28 F). Similar to the heat advisory, early warning about cold temperatures can provide growers some time to protect their crops from frost damage.
Crop phenology tool: The scientists have developed a-crop specific and location-specific crop phenology tool to help users keep track of growing degree days accumulations and estimate critical growth stages. CalAgroClimate uses a high-resolution PRISM dataset to provide near real-time crop phenology information to users. This tool will inform growers about how their crop development compares to previous years, which can be helpful in planning activities specific to critical growth stages.
Pest advisory tool: Similar to crops, development of certain pests and diseases is controlled by temperature and heat unit accumulations. With the pest advisory tool, growers can keep track of estimated pest generations during the growing season to make pest management decisions.
“We are launching the website with this initial set of tools while working on adding more crop-specific information and several new tools in the near future, ” Pathak said. “We look forward to getting feedback from growers who use CalAgroClimate to make it even more useful.”
Genetic insights help rice survive drought and flood
Plants — they're just like us, with unique techniques for handling stress. To save one of the most important crops on Earth from extreme climate swings, scientists are mapping out plants' own stress-busting strategies.
A UC Riverside-led team has learned what happens to the roots of rice plants when they're confronted with two types of stressful scenarios: too much water, or too little. These observations form the basis of new protective strategies.
“This one crop is the major source of calories for upwards of 45 percent of humanity, but its harvests are in danger,” said Julia Bailey-Serres, UCR geneticist and study lead. “In the U.S., floods rival droughts in terms of damage to farmers' crops each year.”
In particular, the researchers examined the roots' response to both types of conditions, because roots are the unseen first responders to flood and drought-related stress.
Their work is described in a new paper published in the journal Developmental Cell.
One key finding is about a cork-like substance, suberin, that's produced by rice roots in response to stress. It helps protect from floods as well as from drought.
“Suberin is a lipid molecule that helps any water drawn up by the roots make it to the shoots, and helps oxygen from shoots to reach roots,” Bailey-Serres said. “If we reinforce the plant's ability to create suberin, rice has better chances for survival in all kinds of weather.”
The researchers were able to identify a network of genes that control suberin production and can use this information for gene editing or selective breeding.
“Understanding suberin is particularly exciting because it is not susceptible to breakdown by soil microbes, so carbon that the plant puts into suberin molecules in the roots is trapped in the ground,” said Alex Borowsky, UCR computational biologist and study co-author.
The researchers also identified the genes controlling some of rice's other stress behaviors.
“One of our interesting findings is that when rice plants are submerged in water, the root cell growth cycle goes on pause, then switches back on shortly after the shoots have access to air,” Bailey-Serres said.
In the future, the research team plans to test how modifying these stress responses can make the plant more resilient to both wet and dry conditions.
“Now that we understand these responses, we have a roadmap to make targeted changes to the rice genome that will result in a more stress-tolerant plant,” Bailey-Serres said.
Though heavy rains and droughts are both increasing as threats, Bailey-Serres has hope that new genetic technology can increase its resilience before it's too late.
“With genome editing, the fact that we can make a tiny but targeted change and protect a plant from disease is amazing. Though our crops are threatened, new technologies give us reasons to hope,” Bailey-Serres said.
The project will also train plant breeders for the future
Wheat products account for roughly 20% of what people eat every day around the globe. As climate changes, wheat crops must adapt to new weather patterns to keep up with demand.
The University of California, Davis, is leading a five-year, $15 million research project to accelerate wheat breeding to meet those new climate realities, as well as to train a new generation of plant breeders.
“Everything is less stable,” said Jorge Dubcovsky, a plant sciences distinguished professor who is leading the grant research. “Everything is changing so you need to be fast. You need to be able to adapt fast.”
The grant from the U.S. Department of Agriculture's National Institute of Food and Agriculture will create a coordinated consortium of 41 wheat breeders and researchers from 22 institutions in 20 states. Researchers from Mexico and the United Kingdom are also participating.
Breeding needs to speed up
“Breeding crops for the future will require new traits, breeding platforms built for quick transfer of traits to elite cultivars, coordination of breeding efforts in public and private domains, and training for current and future plant breeders and researchers,” NIFA said in an announcement about this grant and others related to breeding.
The program involves on-the-ground research, identifying molecular markers and data analysis from multiple institutions to determine genes that will help wheat crops mitigate the effects of climate change. Plant breeding will follow to prove out those findings.
Wheat is unlike other crops in that 60% of the plant varieties — generating about $4 billion in annual production — are developed by public breeding programs rather than private corporations. In many states, wheat growers tax themselves to support basic breeding efforts at public institutions like UC Davis.
Increased coordinated research
The NIFA grant money will lead to more coordinated, sophisticated research. “This grant allows us to do breeding at a level that a good, modern company would do,” Dubcovsky said. “This grant is essential to maintain modern and effective public breeding programs in the U.S.”
The consortium will bring together data and research from across institutions, allowing for more expansive analysis while reducing redundancies. “We can take advantage of the data from everybody,” he said. “By doing that we don't need to duplicate efforts.”
A team in Texas will analyze plant images taken from drones at each institution to extract information about plant growth, water use, nitrogen levels and other data. “Using technology, we can see beyond our human capabilities,” Dubcovsky said. “You can extract a huge amount of information from every plant variety.”
The data from those images will allow researchers to document the plants throughout the life cycle and determine which plants fare better under certain conditions. Genotyping will help researchers obtain information about the plant genome. The combination of these two types of data could speed up breeding cycles, helping wheat crops adapt to a changing environment.
“If we can breed fast, we can adapt to change,” Dubcovsky said. “We are trying to make sustainable improvements in time.”
Training the next generation
The project will also train a cohort of 20 plant Ph.D. students in active breeding programs where they will participate in fieldwork, collect data from drones and DNA samples, and learn to integrate that information to accelerate wheat breeding. The students will participate in online and face-to-face workshops, as well as educational events and national scientific conferences.
Colorado State University, Cornell University, Kansas State University, Michigan State University, Montana State University, Oklahoma State University, Purdue University, South Dakota State University, Texas A&M University, University of Idaho, University of Illinois, University of Minnesota, University of Nebraska, University of Wisconsin, Utah State University, Virginia Tech, Washington State University, and U.S. Department of Agriculture Agricultural Research Service branches in North Dakota, Washington, Kansas and North Carolina are also participating in the consortium./h3>/h3>/h3>/h2>
Findings could help wine industry adapt to climate change
Scientists at UC Davis have identified new root traits that help grapevines resist drought. The findings, published in the journal Annals of Botany, could speed up the development of grape rootstocks that protect vines from dry conditions, helping the grape and wine industry adapt to climate change.
The research, led by Department of Viticulture and Enology Assistant Professor Megan Bartlett, comes as 80% of California is experiencing extreme drought.
Most grapevines are not rooted directly into the ground but are instead grafted onto a rootstock, which forms the underground part of the plant and supports growth above ground.
“Rootstocks are an important tool to manage water stress,” Bartlett said. “Our goal was to identify traits that make rootstocks drought tolerant, so that grape breeders can amplify these traits in new varieties.”
Root cell traits
The study focused on traits measuring drought responses in living root cells.
The research specifically identified capacitance – which measures how much roots shrink as they dehydrate – as an important trait for drought tolerance.
“The water that enters the roots has to cross through a band of living cells to reach the xylem – the network of pipes that carries water up to the leaves,” said Bartlett. Most research has focused on xylem traits, but the living cells are often the first to be damaged during drought.
Water stress can shrink, deform, or even kill the living cells, causing the roots to shrivel away from the soil and lose access to the remaining soil water. Vines are then unable to replace water lost to evaporation and are forced to close the stomata – the small pores on the leaves that take in carbon dioxide for photosynthesis – to prevent severe dehydration. But closing the stomata stops photosynthesis and starves the vine of the sugars it needs to grow and ripen fruit.
This study is the first to test whether traits measuring root shrinkage and cell collapse can capture differences in rootstock drought tolerance.
Cell traits and drought tolerance
The researchers grafted Chardonnay onto eight commercial rootstocks. Half of the vines experienced drought conditions and half were kept well-watered in a greenhouse experiment.
The study found the eight rootstocks were surprisingly diverse and varied widely in their traits. The rootstocks also appeared to acclimate to drought by changing their traits in that the droughted vines were less susceptible to shrinkage and cell collapse than the well-watered vines.
Among the traits, capacitance was especially important for drought tolerance. The rootstocks with a lower capacitance (less root shrinkage) were better able to maintain photosynthesis during drought than other rootstocks.
“This research gives us a new trait to target for breeding more drought tolerant rootstocks,” study co-author and Ph.D. student Gabriela Sinclair said.
The research was supported by the American Vineyard Foundation, UC Davis, and by donations to the department from the Rossi family. Researchers at the University of British Columbia and the USDA-ARS Crops Pathology and Genetics Research Unit also contributed to the study./h3>/h3>/h2>
Study shows sugar, color content should be watched
Warming temperatures over the past 60 years have led to increased wine quality, but a new study looking at sugar and color content in grapes indicates the industry may be facing trouble if trends continue, according to collaborative research out of the University of California, Davis, and University of Bordeaux.
“Quality has increased steadily up to now,” said lead author Kaan Kurtural, a professor of viticulture and enology and an extension specialist at UC Davis. “We just don't know the tipping point.”
Kurtural's research, published in the journal OENO One, focuses on two renowned wine regions — Napa Valley and Bordeaux, France.
Researchers looked at ripening, grape quality and temperature data over six decades in both regions and then confirmed the findings with a five-year trial in Napa. They also consulted wine ratings in publications like Wine Spectator to gauge consumer demand.
One key finding: As temperatures exceeded what was considered the optimal level for quality, the grapes produced better wines.
“Previous research had few field data, but a record of assumptions,” said Kurtural.
Other quality factors at play
Temperature is a factor, but the paper suggests that sugar and color content should not be discounted. The authors also identified a biomarker that affects taste, color and other factors that can be the bellwether for climate change in red-skinned wine grapes.
“Temperature is always there,” he said. “Temperature is not your bellwether.”
Higher temperatures can harm grape composition, including color, taste and aroma. Researchers examined pigment and sugar content of five California vintages of cabernet sauvignon, finding that as the grapes got sweeter the skin and color deteriorated.
The degradation of these quality-related compounds and the observed plateaus of wine quality ratings suggests there can be too much of a good thing.
Researchers have long theorized that increasing temperatures from climate change would lead to shifts in wine-growing regions, opening up some new areas for vineyards and making others unsustainable.
That shift could be a boon to some economies and devastating to others, something the industry should watch.
“Since the 1980s, grapes got riper and they were able to make better flavor and color compounds,” Kurtural said. “Are we going to lose this or adapt more?”
Gregory A. Gambetta with the University of Bordeaux is a corresponding author on the paper.
For more information:
- Kaan Kurtural, Viticulture and Enology, cell 707-200-5378, email@example.com
- Amy Quinton, UC Davis News and Media Relations, cell 530-601-8077, firstname.lastname@example.org
- Emily C. Dooley, College of Agricultural and Environmental Sciences, cell 530-650-6807, email@example.com